Package index
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calcTTest() - calcTTest
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cluster_enrichment() - cluster_enrichment
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combine_omics() - combine_omics Combine two or more omics matrices into one multi-omics matrix with 'tagged' ids.
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correlation_comparison_enrichment() - correlation_comparison_enrichment
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correlation_enrichment() - correlation_enrichment
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enrichment_in_abundance() - enrichment_in_abundance
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enrichment_in_groups() - enrichment_in_groups
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enrichment_in_relationships() - enrichment_in_relationships
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get_pathway_information() - get_pathway_information
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kinasesubstrates - Kinase substrate lists
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krbpaths - KEGG, Reactome, BioCarta Pathways
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leapR() - leapR
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longlist - Long list of patient samples
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ncipid - NCI Gene lists
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plot_leapr_bar() - Plot leapR pathway bars (single panel)
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read_gene_sets() - read_gene_sets
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shortlist - A list of pathways and genes that comprise these pathways from msigdb