HyperNetX
2.1
Home
Overview
Installing HyperNetX
Glossary
HyperNetX Packages
A Gentle Introduction to Hypergraph Mathematics
Hypergraph Constructors
Visualization Widget
Algorithms: Modularity and Clustering
Publications
License
HyperNetX
Index
Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
K
|
L
|
M
|
N
|
O
|
P
|
R
|
S
|
T
|
U
A
add() (classes.Entity method)
(classes.entity.Entity method)
add_element() (classes.Entity method)
(classes.entity.Entity method)
add_elements_from() (classes.Entity method)
(classes.entity.Entity method)
add_to_column() (in module algorithms)
(in module algorithms.homology_mod2)
add_to_row() (in module algorithms)
(in module algorithms.homology_mod2)
adjacency_matrix() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
algorithms
module
algorithms.contagion
module
algorithms.generative_models
module
algorithms.homology_mod2
module
algorithms.hypergraph_modularity
module
algorithms.laplacians_clustering
module
algorithms.s_centrality_measures
module
assign_cell_properties() (classes.EntitySet method)
(classes.entityset.EntitySet method)
assign_properties() (classes.Entity method)
(classes.entity.Entity method)
assign_weights() (in module classes.helpers)
AttrList (class in classes.helpers)
auxiliary_matrix() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
B
betti() (in module algorithms)
(in module algorithms.homology_mod2)
betti_numbers() (in module algorithms)
(in module algorithms.homology_mod2)
bipartite() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
bkMatrix() (in module algorithms)
(in module algorithms.homology_mod2)
boundary_group() (in module algorithms)
(in module algorithms.homology_mod2)
C
cell_properties (classes.EntitySet property)
(classes.entityset.EntitySet property)
cell_weights (classes.Entity property)
(classes.entity.Entity property)
centrality_stats() (in module reports)
(in module reports.descriptive_stats)
chain_complex() (in module algorithms)
(in module algorithms.homology_mod2)
children (classes.Entity property)
(classes.entity.Entity property)
chung_lu_hypergraph() (in module algorithms)
(in module algorithms.generative_models)
classes
module
classes.entity
module
classes.entityset
module
classes.helpers
module
classes.hypergraph
module
collapse_edges() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
collapse_identical_elements() (classes.EntitySet method)
(classes.entityset.EntitySet method)
collapse_nodes() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
collapse_nodes_and_edges() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
collective_contagion() (in module algorithms)
(in module algorithms.contagion)
comp_dist() (in module reports)
(in module reports.descriptive_stats)
component_subgraphs() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
components() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
conductance() (in module algorithms.hypergraph_modularity)
connected_component_subgraphs() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
connected_components() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
contagion_animation() (in module algorithms)
(in module algorithms.contagion)
create_properties() (in module classes.helpers)
D
data (classes.Entity property)
(classes.entity.Entity property)
dataframe (classes.Entity property)
(classes.entity.Entity property)
(classes.Hypergraph property)
(classes.hypergraph.Hypergraph property)
dcsbm_hypergraph() (in module algorithms)
(in module algorithms.generative_models)
degree
degree() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
degree_dist() (in module reports)
(in module reports.descriptive_stats)
diameter() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
dict2part() (in module algorithms)
(in module algorithms.hypergraph_modularity)
dict_depth() (in module classes.helpers)
dim() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
dimensions (classes.Entity property)
(classes.entity.Entity property)
dimsize (classes.Entity property)
(classes.entity.Entity property)
discrete_SIR() (in module algorithms)
(in module algorithms.contagion)
discrete_SIS() (in module algorithms)
(in module algorithms.contagion)
dist_stats() (in module reports)
(in module reports.descriptive_stats)
distance() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
draw() (in module drawing)
(in module drawing.rubber_band)
(in module drawing.two_column)
draw_hyper_edge_labels() (in module drawing.rubber_band)
draw_hyper_edges() (in module drawing.rubber_band)
(in module drawing.two_column)
draw_hyper_labels() (in module drawing.rubber_band)
(in module drawing.two_column)
draw_hyper_nodes() (in module drawing.rubber_band)
draw_two_column() (in module drawing)
drawing
module
drawing.rubber_band
module
drawing.two_column
module
drawing.util
module
dual
dual() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
E
edge nodes (aka edge elements)
edge_adjacency_matrix() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
edge_diameter() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
edge_diameters() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
edge_distance() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
edge_neighbors() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
edge_props (classes.Hypergraph property)
(classes.hypergraph.Hypergraph property)
edge_size_dist() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
(in module reports)
(in module reports.descriptive_stats)
edges (classes.Hypergraph property)
(classes.hypergraph.Hypergraph property)
elements (classes.Entity property)
(classes.entity.Entity property)
elements_by_column() (classes.Entity method)
(classes.entity.Entity method)
elements_by_level() (classes.Entity method)
(classes.entity.Entity method)
empty (classes.Entity property)
(classes.entity.Entity property)
encode() (classes.Entity method)
(classes.entity.Entity method)
(in module classes.helpers)
Entity (class in classes)
(class in classes.entity)
Entity and Entity set
EntitySet (class in classes)
(class in classes.entityset)
erdos_renyi_hypergraph() (in module algorithms)
(in module algorithms.generative_models)
F
from_bipartite() (classes.Hypergraph class method)
(classes.hypergraph.Hypergraph class method)
from_incidence_dataframe() (classes.Hypergraph class method)
(classes.hypergraph.Hypergraph class method)
from_incidence_matrix() (classes.Hypergraph class method)
(classes.hypergraph.Hypergraph class method)
from_numpy_array() (classes.Hypergraph class method)
(classes.hypergraph.Hypergraph class method)
G
get_cell_properties() (classes.EntitySet method)
(classes.entityset.EntitySet method)
(classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
get_cell_property() (classes.EntitySet method)
(classes.entityset.EntitySet method)
get_collapsed_size() (in module drawing.util)
get_default_radius() (in module drawing.rubber_band)
get_frozenset_label() (in module drawing.util)
get_line_graph() (in module drawing.util)
get_linegraph() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
get_pi() (in module algorithms)
(in module algorithms.laplacians_clustering)
get_properties() (classes.Entity method)
(classes.entity.Entity method)
(classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
get_property() (classes.Entity method)
(classes.entity.Entity method)
get_set_layering() (in module drawing.util)
Gillespie_SIR() (in module algorithms)
(in module algorithms.contagion)
Gillespie_SIS() (in module algorithms)
(in module algorithms.contagion)
H
homology_basis() (in module algorithms)
(in module algorithms.homology_mod2)
hypergraph
Hypergraph (class in classes)
(class in classes.hypergraph)
hypergraph_homology_basis() (in module algorithms)
(in module algorithms.homology_mod2)
I
incidence
incidence matrix
incidence_dataframe() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
incidence_dict (classes.Entity property)
(classes.entity.Entity property)
(classes.Hypergraph property)
(classes.hypergraph.Hypergraph property)
incidence_matrix() (classes.Entity method)
(classes.entity.Entity method)
(classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
index() (classes.Entity method)
(classes.entity.Entity method)
indices() (classes.Entity method)
(classes.entity.Entity method)
individual_contagion() (in module algorithms)
(in module algorithms.contagion)
inflate() (in module drawing.util)
inflate_kwargs() (in module drawing.util)
info() (in module reports)
(in module reports.descriptive_stats)
info_dict() (in module reports)
(in module reports.descriptive_stats)
interpret() (in module algorithms)
(in module algorithms.homology_mod2)
is_connected() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
is_empty() (classes.Entity method)
(classes.entity.Entity method)
isstatic (classes.Entity property)
(classes.entity.Entity property)
K
kchainbasis() (in module algorithms)
(in module algorithms.homology_mod2)
kumar() (in module algorithms)
(in module algorithms.hypergraph_modularity)
L
labels (classes.Entity property)
(classes.entity.Entity property)
last_step() (in module algorithms)
(in module algorithms.hypergraph_modularity)
layout_hyper_edges() (in module drawing.rubber_band)
layout_node_link() (in module drawing.rubber_band)
layout_two_column() (in module drawing.two_column)
level() (classes.Entity method)
(classes.entity.Entity method)
linear() (in module algorithms)
(in module algorithms.hypergraph_modularity)
logical_dot() (in module algorithms)
(in module algorithms.homology_mod2)
logical_matadd() (in module algorithms)
(in module algorithms.homology_mod2)
logical_matmul() (in module algorithms)
(in module algorithms.homology_mod2)
M
majority() (in module algorithms)
(in module algorithms.hypergraph_modularity)
majority_vote() (in module algorithms)
(in module algorithms.contagion)
matmulreduce() (in module algorithms)
(in module algorithms.homology_mod2)
memberships (classes.Entity property)
(classes.entity.Entity property)
(classes.EntitySet property)
(classes.entityset.EntitySet property)
merge_nested_dicts() (in module classes.helpers)
modularity() (in module algorithms)
(in module algorithms.hypergraph_modularity)
module
algorithms
algorithms.contagion
algorithms.generative_models
algorithms.homology_mod2
algorithms.hypergraph_modularity
algorithms.laplacians_clustering
algorithms.s_centrality_measures
classes
classes.entity
classes.entityset
classes.helpers
classes.hypergraph
drawing
drawing.rubber_band
drawing.two_column
drawing.util
reports
reports.descriptive_stats
N
neighbors() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
node_diameters() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
node_props (classes.Hypergraph property)
(classes.hypergraph.Hypergraph property)
nodes (classes.Hypergraph property)
(classes.hypergraph.Hypergraph property)
norm_lap() (in module algorithms)
(in module algorithms.laplacians_clustering)
number_of_edges() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
number_of_nodes() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
O
order() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
P
part2dict() (in module algorithms)
(in module algorithms.hypergraph_modularity)
prob_trans() (in module algorithms)
(in module algorithms.laplacians_clustering)
properties (classes.Entity property)
(classes.entity.Entity property)
(classes.Hypergraph property)
(classes.hypergraph.Hypergraph property)
R
reduced_row_echelon_form_mod2() (in module algorithms)
(in module algorithms.homology_mod2)
remove() (classes.Entity method)
(classes.entity.Entity method)
(classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
remove_edges() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
remove_element() (classes.Entity method)
(classes.entity.Entity method)
remove_elements_from() (classes.Entity method)
(classes.entity.Entity method)
remove_nodes() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
remove_row_duplicates() (in module classes.helpers)
remove_singletons() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
reports
module
reports.descriptive_stats
module
restrict_to() (classes.EntitySet method)
(classes.entityset.EntitySet method)
restrict_to_edges() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
restrict_to_indices() (classes.Entity method)
(classes.entity.Entity method)
restrict_to_levels() (classes.Entity method)
(classes.entity.Entity method)
(classes.EntitySet method)
(classes.entityset.EntitySet method)
restrict_to_nodes() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
S
s_betweenness_centrality() (in module algorithms)
(in module algorithms.s_centrality_measures)
s_closeness_centrality() (in module algorithms)
(in module algorithms.s_centrality_measures)
s_comp_dist() (in module reports)
(in module reports.descriptive_stats)
s_component_subgraphs() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
s_components() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
s_connected_components() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
s_eccentricity() (in module algorithms)
(in module algorithms.s_centrality_measures)
s_edge_diameter_dist() (in module reports)
(in module reports.descriptive_stats)
s_harmonic_centrality() (in module algorithms)
(in module algorithms.s_centrality_measures)
s_harmonic_closeness_centrality() (in module algorithms)
(in module algorithms.s_centrality_measures)
s_node_diameter_dist() (in module reports)
(in module reports.descriptive_stats)
set_cell_property() (classes.EntitySet method)
(classes.entityset.EntitySet method)
set_property() (classes.Entity method)
(classes.entity.Entity method)
set_state() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
shape (classes.Hypergraph property)
(classes.hypergraph.Hypergraph property)
simple hypergraph
singletons() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
size() (classes.Entity method)
(classes.entity.Entity method)
(classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
smith_normal_form_mod2() (in module algorithms)
(in module algorithms.homology_mod2)
spec_clus() (in module algorithms)
(in module algorithms.laplacians_clustering)
strict() (in module algorithms)
(in module algorithms.hypergraph_modularity)
subhypergraph
subhypergraph induced by a set of nodes
swap_columns() (in module algorithms)
(in module algorithms.homology_mod2)
swap_rows() (in module algorithms)
(in module algorithms.homology_mod2)
T
threshold() (in module algorithms)
(in module algorithms.contagion)
toplex
toplex_dist() (in module reports)
(in module reports.descriptive_stats)
toplexes() (classes.Hypergraph method)
(classes.hypergraph.Hypergraph method)
translate() (classes.Entity method)
(classes.entity.Entity method)
translate_arr() (classes.Entity method)
(classes.entity.Entity method)
transpose_inflated_kwargs() (in module drawing.util)
two_section() (in module algorithms)
(in module algorithms.hypergraph_modularity)
U
uid (classes.Entity property)
(classes.entity.Entity property)
uidset (classes.Entity property)
(classes.entity.Entity property)
uidset_by_column() (classes.Entity method)
(classes.entity.Entity method)
uidset_by_level() (classes.Entity method)
(classes.entity.Entity method)